The lecture part of class will be 9:00–10:20 am
The lab
component will be homework help and Q&A with Alec 10:20–10:50 am
The lecture component will be recorded and posted
If you are auditing the class I need to add you manually to the listserv epi204-s21@ucdavis.edu
so please let me know if you change from enrolled to auditing.
Introductory Statistics with R (Textbook)
https://cran.r-project.org/bin/windows/base/
https://www.rstudio.com/products/rstudio/
https://rstudio-education.github.io/hopr/starting.html
Logistic Regression: A Self-Learning Text (3rd ed.), Kleinbaum & Klein, Springer, 2010
Available to download at no cost
https://link.springer.com/book/10.1007/978-1-4419-1742-3
Use PulseSecure VPN if off campus.
Survival Analysis: A Self-Learning Text (3rd ed.), Kleinbaum & Klein, Springer, 2012
Available to download at no cost
https://link.springer.com/book/10.1007/978-1-4419-6646-9
Use PulseSecure VPN if off campus.
March 30, 2021
Reading: Logistic Regression Chapters 1–3
Presentation: Introduction to Logistic Regression
Homework: Homework 1; due 4/8/21
April 1, 2021
Reading: Logistic Regression Chapter 4
Powerpoint: Logistic Regression and Likelihood
Homework: HW 2a; due 4/8/21
Homework: Homework 2b; due 4/8/21
April 6, 2021
Reading: Logistic Regression Chapter 5
Powerpoint: Inference for Logistic Regression
Homework: Homework 3a; Homework 3b; due 4/15/21
April 8, 2021
Reading: Logistic Regression Chapters 6-8
Powerpoint: Variable Selection and Modeling in Logistic Regression
Homework: Homework 3c; due 4/15/21
April 13, 2021
Reading: Logistic Regression Chapters 9 and 10
Powerpoint: Diagnostics and Goodness of Fit
Homework: See below; due 4/22/2021
April 15, 2021
Reading: Logistic Regression Chapters 9 and 10
Powerpoint: Diagnostics and Goodness of Fit
Homework: Homework 4; due 4/22/2021
April 20, 2021
Reading: Logistic Regression Chapters 9 and 10
Powerpoint: Prediction and Classification
Powerpoint: Logistic Regression for Matched Data
Homework: ROC curve for your model; due 4/29/2021
April 22, 2021
Reading: Logistic Regression Chapter 11
Powerpoint: PCR and ELISA Assays for the Novel Coronavirus and COVID-19
Powerpoint: Poisson Regression
Homework: Poisson regression exercise from Powerpoint, due 4/29/2021
Logistic Regression Assignment Solutions
April 27, 2021
Reading: Survival Analysis Chapters 1 and 2
Powerpoint: Introduction to Survival Analysis
April 29, 2021
Reading: Survival Analysis Chapters 1 and 2
Powerpoint: Introduction to Survival Analysis (continued)
Powerpoint: Stanford Seroprevalence Study
May 4, 2021
Reading: Survival Analysis Chapter 3
Powerpoint: Survival Regression with the Cox Model I
May 6, 2021
Reading: Survival Analysis Chapter 3
Powerpoint: Survival Regression with the Cox Model II
Homework: Homework with the addicts data set, due 5/13/2021
May 11, 2021
Reading: Survival Analysis Chapter 4
Powerpoint: Model Building and Checking for Cox Models
May 13, 2021
Reading: Survival Analysis Chapter 4
Powerpoint: Model Building and Checking for Cox Models
May 18, 2021
Reading: Survival Analysis Chapter 5, 6
Powerpoint: Stratified Cox Models
Powerpoint: Time-Dependent Covariates and Multiple Events
Homework: See slides for Stratified Cox Models, due 5/27/21
May 20, 2021
Reading: Survival Analysis Chapter 7
Powerpoint: Parametric Survival Regression
May 25, 2021
Powerpoint: Introduction to Random Effects and Mixed Models
Homework: Survival Analysis Homework, due 6/3/21
May 27, 2021
Powerpoint: Multilevel Models
June 1, 2021
Powerpoint: Multilevel Models II
Powerpoint: Infectious Disease Modeling
June 3, 2012
Powerpoint: Logistic Regression Solutions
Powerpoint: Survival Analysis Assignment Solutions