Class is Tuesdays and Thursdays 2:10–4:00 pm
The lecture part of class will be roughly 2:10–3:30 pm
The lab component will be homework help and Q&A with Brittany, roughly 3:40–4:00 pm
Office Hours Med Sci 1C 140B:
Tuesdays 10:30am–11:30am in person at my office.
Or by appointment, in person or Zoom.
The lecture slides will be posted.
Contact Information:
Office 140B Med Sci 1 C Office Phone (530) 752-6999 Cell (530)-304-1019 dmrocke@ucdavis.edu Web Site http://dmrocke.ucdavis.edu/ Email List bst-sta222-f24@ucdavis.edu Canvas Site BST 222
There will be no class October 24.
There will be no class or office hours November 26 and 28 due to the Thanksgiving holiday.
The midterm examination will be on October 31 in class.
The final project will be due December 10.
Introductory Statistics with R (Textbook)
https://cran.r-project.org/bin/windows/base/
https://www.rstudio.com/products/rstudio/
https://rstudio-education.github.io/hopr/starting.html
Required:
Survival Analysis : Techniques for Censored and Truncated Data.
Klein, John P. and Moeschberger, Melvin L., Springer, 2005. (Free e-book from Springer site)
Optional:
Statistical Analysis of Failure Time Data, Second Edition.
John Kalbfleisch and Ross Prentice, Wiley, 2002.
Mostly useful for parametric survival analysis.Applied Survival Analysis Using R.
Dirk Moore, Springer, 2016.Survival Analysis: A Self-Learning Text (3rd ed.),
Kleinbaum & Klein, Springer, 2012.
September 26, 2024
Reading: KM Chapter 2
Presentation: Introduction to Survival Analysis
Homework: Homework 1; due 10/10/24
October 1, 2024
Reading: KM Chapter 3, Sections 1–3, 5
Powerpoint:Basic Quantities and Models
October 3, 2024
Reading: KM Chapter 4, Sections 1, 2
Powerpoint:Survival Data and Methods
October 8, 2024
Reading: KM Chapter 4, Section 3
Powerpoint:Nonparametric Survival Analysis
Homework: Homework 2; due 10/17/24
October 10, 2024
Reading: KM Chapter 8, Sections 1–4
Powerpoint:Survival Regression
October 15, 2024
Reading: KM Chapter 8, Sections 2, 4, 6
Powerpoint: Hypothesis Tests
Homework: Homework 3; due 10/24/24
October 17, 22, 2024
Reading: KM Chapter 8, Sections 7, 8
Powerpoint: Model Building and Checking
Homework: Homework 4; due 11/7/24
October 24, 2024
No Class
October 29, 2024
Reading: KM Chapter 9, Sections 1–3
Powerpoint: Extensions to the Cox Model: Stratification
October 31, 2024
Midterm Examination
November 5, 7, 2024
Reading: KM Chapter 9, Sections 1–3
Powerpoint: Extensions to the Cox Model: Time Dependent Covariates and Multiple Events
Homework: Homework 5; due 11/19/24
November 12, 14, 2024
Reading:
Powerpoint: Multiple Testing and Comparisons
November 19, 2024
Reading: KM Sections 5.1 and 5.2
Powerpoint: Interval and Double Censoring
Powerpoint: Final Project Presentation
Homework: Final Project; due 12/10/24
November 21, 2024
Reading: KM Chapter 12
Powerpoint: Parametric Survival Models
November 26, 28, 2024
Thanksgiving, No Class
December 3, 5, 2024
Reading: KM Chapter 12
Powerpoint: Parametric Survival Regression