The lecture part of class will be roughly 2:10–3:30 pm
The lab component will be homework help and Q&A with Brittany, roughly 3:40–4:00 pm
Office Hours Med Sci 1C 140B:
Tuesdays 10:30am–11:30am in person at my office.
Or by appointment, in person or Zoom.
The lecture slides will be posted.
Contact Information:
Office 140B Med Sci 1 C Office Phone (530) 752-6999 Cell (530)-304-1019 dmrocke@ucdavis.edu Web Site http://dmrocke.ucdavis.edu/ Email List bst-sta222-f22@ucdavis.edu Canvas Site BST 222
There will be no class or office hours on November 21 due to the Thanksgiving holiday. I will be available for questions by Zoom.
Introductory Statistics with R (Textbook)
https://cran.r-project.org/bin/windows/base/
https://www.rstudio.com/products/rstudio/
https://rstudio-education.github.io/hopr/starting.html
Required:
Survival Analysis : Techniques for Censored and Truncated Data.
Klein, John P. and Moeschberger, Melvin L., Springer, 2005. (Free e-book from Springer site)
Optional:
Statistical Analysis of Failure Time Data, Second Edition.
John Kalbfleisch and Ross Prentice, Wiley, 2002.
Mostly useful for parametric survival analysis.Applied Survival Analysis Using R.
Dirk Moore, Springer, 2016.Survival Analysis: A Self-Learning Text (3rd ed.),
Kleinbaum & Klein, Springer, 2012.
September 28, 2023
Reading: KM Chapter 2
Presentation: Introduction to Survival Analysis
Homework: Homework 1; due 10/10/23
October 3, 2023
Reading: KM Chapter 3, Sections 1–3, 5
Powerpoint:Basic Quantities and Models
October 5, 2023
Reading: KM Chapter 4, Sections 1, 2
Powerpoint:Survival Data and Methods
October 10, 2023
Reading: KM Chapter 4, Section 3
Powerpoint:Nonparametric Survival Analysis
Homework: Homework 2; due 10/19/23
October 12, 2023
Reading: KM Chapter 8, Sections 1–4
Powerpoint:Survival Regression
Homework: Homework 3; due 10/26/23
October 17, 2023
Reading: KM Chapter 8, Sections 2, 4, 6
Powerpoint: Hypothesis Tests
October 19, 24, 2023
Reading: KM Chapter 8, Sections 7, 8
Powerpoint: Model Building and Checking
Homework: Homework 4; due 11/2/23
October 26, 2023
Reading: KM Chapter 9, Sections 1–3
Powerpoint: Extensions to the Cox Model: Stratification
Homework: Homework 5; due 11/9/23
October 31, November 2, 2023
Reading: KM Chapter 9, Sections 1–3
Powerpoint: Extensions to the Cox Model: Time Dependent Covariates and Multiple Events
Powerpoint: Midterm Project
Homework: Midterm Project; due 11/16/23
November 7, 2023
Reading:
Powerpoint: Multiple Testing and Comparisons
Homework: Final Group Project; Presented in class 12/5 or 12/7
November 9, 2023
Reading: KM Sections 5.1 and 5.2
Powerpoint: Interval and Double Censoring
November 14, 2023
Reading: KM Chapter 12
Powerpoint: Parametric Survival Models
November 16, 28, 2023
Reading: KM Chapter 12
Powerpoint: Parametric Survival Regression
November 21, 23, 2023
Thanksgiving, No Class
November 30, 2023
Possible Exam?
December 5, 7, 2023
In class presentation of final group projects.